Class: VariantIdentifier

A unique identifier for a sequence alteration.

 classDiagram
    class VariantIdentifier
    click VariantIdentifier href "../VariantIdentifier"
      VariantIdentifier : hgvsid

      VariantIdentifier : other

      VariantIdentifier : rsid

Slots

Name	Cardinality and Range	Description	Inheritance
hgvsid	1 String	HGVSid	direct
rsid	0..1 String	dbsnp rsid	direct
other	0..1 String	Other identifiers	direct

Usages

used by	used in	type	used
SequenceAlteration	has_identifier	range	VariantIdentifier

Identifier and Mapping Information

Schema Source

from schema: https://ican.fr/

Mappings

Mapping Type	Mapped Value
self	sio:000675
native	ican:VariantIdentifier

LinkML Source

Direct

name: VariantIdentifier
description: A unique identifier for a sequence alteration.
from_schema: https://ican.fr/
attributes:
  hgvsid:
    name: hgvsid
    description: HGVSid.
    from_schema: https://ican.fr/
    rank: 1000
    slot_uri: sio:000300
    domain_of:
    - VariantIdentifier
    range: string
    required: true
  rsid:
    name: rsid
    description: dbsnp rsid.
    from_schema: https://ican.fr/
    rank: 1000
    slot_uri: sio:000300
    domain_of:
    - VariantIdentifier
    range: string
    required: false
  other:
    name: other
    description: Other identifiers.
    from_schema: https://ican.fr/
    rank: 1000
    slot_uri: sio:000300
    domain_of:
    - VariantIdentifier
    range: string
    required: false
class_uri: sio:000675

Induced

name: VariantIdentifier
description: A unique identifier for a sequence alteration.
from_schema: https://ican.fr/
attributes:
  hgvsid:
    name: hgvsid
    description: HGVSid.
    from_schema: https://ican.fr/
    rank: 1000
    slot_uri: sio:000300
    alias: hgvsid
    owner: VariantIdentifier
    domain_of:
    - VariantIdentifier
    range: string
    required: true
  rsid:
    name: rsid
    description: dbsnp rsid.
    from_schema: https://ican.fr/
    rank: 1000
    slot_uri: sio:000300
    alias: rsid
    owner: VariantIdentifier
    domain_of:
    - VariantIdentifier
    range: string
    required: false
  other:
    name: other
    description: Other identifiers.
    from_schema: https://ican.fr/
    rank: 1000
    slot_uri: sio:000300
    alias: other
    owner: VariantIdentifier
    domain_of:
    - VariantIdentifier
    range: string
    required: false
class_uri: sio:000675